In semantic segmentation, training data down-sampling is commonly performed due to resource limitations, the need to adapt image size to the model input, or to improve data augmentation. This down-sampling typically employs different strategies for the image data and the annotated labels. Such discrepancy leads to mismatches between the down-sampled colour and ground-truth label images. Hence, the training performance significantly decreases as the down-sampling factor increases. In this paper, we bring together the down-sampling strategies for the image data and the training labels. To that aim, we propose a novel framework for label down-sampling via soft-labelling that better conserves label information after down-sampling, thereby, fully aligning soft-labels with image data to keep the distribution of the sampled pixels for down-sampling. This proposal also produces reliable annotations for under-represented semantic classes. Altogether, it allows training competitive models at lower resolutions. Experiments show that our proposal outperforms other down-sampling strategies. Moreover, state-of-the-art performance is achieved for reference benchmarks, but employing significantly fewer computational resources than foremost methods. This proposal enables competitive research for semantic segmentation under resource constraints.