This study integrates gravity and aeromagnetic datasets to delineate basement depth and characterise the subsurface structural framework of the Gerad Graben in the western Sirt Basin, Libya. Techniques including high-pass filtering, Centre for Exploration Targeting (CET) edge detection, Source Parameter Imaging (SPI), and Euler Deconvolution (ED) were applied to residual gravity and residual reduced-to-pole (RTP) magnetic data to enhance fault mapping and basement morphology. Tests of various cutoff wavelengths show that 10 km for gravity and 15 km for magnetic data provide optimal resolution of shallow structures while preserving deeper trends. Forward 2D GM-SYS modelling and Werner Deconvolution further constrained the geometry and depth of intrusive bodies and fault systems. Results reveal a structurally complex graben with NE-SW, NW-SE, ENE-WSW, and N-S trending faults, indicating multiphase tectonic deformation. Graben-bounding faults show displacement values of 600–4290 m, and basement depths in the central depocenter reach 4275–4300 m, validated by well NTF-50. Magnetic anomalies indicate intrusive igneous bodies, including NW-SE-trending sills and dikes, associated with the Tibesti and Al Haruj volcanic provinces. These intrusions likely caused localised heating, uplift, and fault reactivation. The integrated interpretation supports a tectono-magmatic evolution involving successive rifting phases from the Paleozoic to Cenozoic, influenced by inherited Precambrian structures. These features, coupled with substantial sediment infill and magmatic activity, enhance the hydrocarbon potential of the Gerad Graben, suggesting the presence of structural and stratigraphic traps within the broader of Sirt Basin petroleum system.