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Applicability of deep clustering and spectral clustering in farmland management zoning
Transactions of the Chinese Society of Agricultural Engineering 2025, 41(14): 228-236
Published: 30 July 2025
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Management zoning is one of the most important procedures in precision agriculture. Among them, the fuzzy C-means (FCM) and K-means have been commonly used to divide the management zones. However, the conventional methods cannot treat the high-dimensional and non-linear data, due to the data scale and the attribute complexity. This study aims to introduce spectral clustering and deep clustering methods, compare them with FCM and K-means, and evaluate their performance in farmland management zoning, with the goal of providing more scientific decision-making support for precision agriculture. The research object was taken as the farmland at the park scale. According to the field data collection, the soil fertility index (SFI) was constructed to combine the comprehensive weight and multiple soil attributes. The spatial distribution of soil attributes was obtained to quantify the soil fertility level, which was input into the clustering model as a zoning indicator. The Kappa consistency test and analysis of variance were carried out to compare spectral clustering and deep clustering. A systematic evaluation was also made to explore their potential for the management of zoning in precision agriculture. The results showed that the soil fertility index better represented the spatial distribution of the soil fertility in the study area. The fertility level was relatively high in the central area, while the lower was observed in the northeast. The fertility level above the medium level (SFI≥0.5) accounted for 84.06% of the cultivated land, indicating the high soil fertility. The Kappa consistency test showed that there was the highest consistency between the deep clustering and the FCM (the Kappa coefficient was 0.767), followed by that between the spectral clustering and the deep clustering (the Kappa coefficient was 0.657). The consistency between the K-means and the rest was the lowest (the Kappa coefficient was only 0.21-0.23). The significance analysis shows that there were significant differences among the categories that were divided by the four clusterings when the number of clusters was 2 and 3. While there was no significant difference among some categories when the number of clusters was 4. The averaged silhouette coefficient (ASC) and the Calinski Harabasz index (CHI) showed that spectral clustering performed best when the number of clusters was 3. Its zoning was used to significantly distinguish the indicators, such as the soil nutrients, apparent electrical conductivity, vegetation index, and previous crop yield within different management zones. There was a decrease in the coefficient of variation of each variable within each zone. The spectral clustering effectively captured the spatial variability of the soil attributes and crop growth. There was consistency with the spatial distribution of the soil attributes after zoning. In conclusion, the spectral clustering was performed better than before in the spatial data zoning. The map of the management zoning was generated to more accurately reveal the spatial heterogeneity for the farmland management zoning. The finding can provide a more scientific and efficient zoning decision for precision agriculture.

Issue
Non-Destructive Monitoring of Rice Growth Key Indicators Based on Fixed-Wing UAV Multispectral Images
Scientia Agricultura Sinica 2023, 56(21): 4175-4191
Published: 01 November 2023
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【Background】

In recent years, with the rapid development of remote sensing technology, real-time and non-destructive monitoring of crop growth status has become a research hotspot. Remote sensing-derived agricultural information will provide guidance for the precise management of large-scale crops. Among various remote sensing monitoring platforms, unmanned aerial vehicles (UAVs) have attracted wide attention due to their simple operation and low cost. UAVs equipped with multispectral cameras can quickly obtain crop growth conditions.

【Objective】

This study attempted to combine texture information and spectral information of multispectral images of fixed-wing UAVs to explore the monitoring effect of “atlas” information on rice growth indicators.

【Method】

A two-year rice field experiment involving different sowing dates, varieties, planting methods and nitrogen levels was conducted. During the key growth stages of rice, remote sensing images of the rice canopy were obtained using a Sequoia multispectral camera mounted on a fixed-wing UAV. Shoot destructive sampling was conducted simultaneously to obtain leaf area index (LAI), aboveground biomass (AGB), plant nitrogen content (PNC) and other agronomic indexes of rice. Simple regression, partial least squares regression and artificial neural network algorithms were used to construct rice growth index monitoring model based on multispectral images of fixed-wing UAV. The monitoring effects of spectral texture information in different models were compared and analyzed.

【Result】

The quantitative relationship between vegetation index (VI), single-band texture features and rice LAI, AGB, and PNC was explored using simple linear regression. The results showed that vegetation indexes had strong correlations with LAI and AGB, with the best-performing indexes being CIRE and NDRE, with R2 values of 0.80 and 0.76, respectively. However, for PNC monitoring, vegetation indexes did not achieve ideal results, with the best-performing RESAVI and NDRE having R2 values of only 0.13 with PNC. Further analysis using simple linear regression revealed that single-band texture features did not perform well in monitoring rice growth indicators. In order to further analyze the monitoring effect of image texture on the above three indexes, normalized texture indexes (NDTI), ratio texture indexes (RTI), and difference texture indexes (DTI) were constructed by referring to the construction method of VI. Correlation analysis showed that the newly constructed texture index (TI) improved the monitoring accuracy of rice growth indicators compared to single-band texture feature but did not perform better than vegetation indexes. To combine spectral and texture information, partial least squares and artificial neural network modeling methods were adopted in this paper. VI and VI+TI were used as different input parameter combinations to construct rice LAI, AGB and PNC monitoring models. The results showed that both partial least squares and artificial neural network modeling methods significantly improved the monitoring accuracy compared to simple linear regression. The best performance was achieved using VI+TI as input variables and an artificial neural network model for validation, with validation R2 values for LAI, AGB, and PNC models increasing from 0.75, 0.72, and 0.26 to 0.86, 0.92, and 0.86, respectively, while RMSE values were significantly reduced.

【Conclusion】

The monitoring accuracy of rice LAI, AGB and PNC can be effectively improved by using the fixed-wing UAV to collect multispectral images of rice canopy and using the texture features and reflectance information as input parameters of the model through the model construction method of artificial neural network. The research results will provide a theoretical basis for rapid monitoring of large area crop growth.

Open Access Research paper Issue
Effects of dense planting patterns on photosynthetic traits of different vertical layers and yield of wheat under different nitrogen rates
The Crop Journal 2024, 12(2): 594-604
Published: 20 March 2024
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Downloads:10

A two-year field experiment was conducted to measure the effects of densification methods on photosynthesis and yield of densely planted wheat. Inter-plant and inter-row distances were used to define rate-fixed pattern (RR) and row-fixed pattern (RS) density treatments. Meanwhile, four nitrogen (N) rates (0, 144, 192, and 240 kg N ha−1, termed N0, N144, N192, and N240) were applied with three densities (225, 292.5, and 360 × 104 plants ha−1, termed D225, D292.5, and D360). The wheat canopy was clipped into three equal vertical layers (top, middle, and bottom layers), and their chlorophyll density (ChD) and photosynthetically active radiation interception (FIPAR) were measured. Results showed that the response of ChD and FIPAR to N rate, density, and pattern varied with different layers. N rate, density, and pattern had significant interaction effects on ChD. The maximum values of whole-canopy ChD in the two seasons appeared in N240 combined with D292.5 and D360 under RR, respectively. Across two growing seasons, FIPAR values of RR were higher than those of RS by 29.37% for the top layer and 5.68% for the middle layer, while lower than those of RS by 20.62% for the bottom layer on average. With a low N supply (N0), grain yield was not significantly affected by density for both patterns. At N240, increasing density significantly increased yield under RR, but D360 of RS significantly decreased yield by 3.72% and 9.00% versus D225 in two seasons, respectively. With an appropriate and sufficient N application, RR increased the yield of densely planted wheat more than RS. Additionally, the maximum yield in two seasons appeared in the combination of D360 with N144 or N192 rather than of D225 with N240 under both patterns, suggesting that dense planting combined with an appropriate N-reduction application is feasible to increase photosynthesis capacity and yield.

Open Access Research Article Issue
Interaction of Genotype, Environment, and Management on Organ-Specific Critical Nitrogen Dilution Curve in Wheat
Plant Phenomics 2023, 5: 0078
Published: 02 August 2023
Abstract Collect

The organ-specific critical nitrogen (Nc) dilution curves are widely thought to represent a new approach for crop nitrogen (N) nutrition diagnosis, N management, and crop modeling. The Nc dilution curve can be described by a power function (Nc = A1·W−A2), while parameters A1 and A2 control the starting point and slope. This study aimed to investigate the uncertainty and drivers of organ-specific curves under different conditions. By using hierarchical Bayesian theory, parameters A1 and A2 of the organ-specific Nc dilution curves for wheat were derived and evaluated under 14 different genotype × environment × management (G × E × M) N fertilizer experiments. Our results show that parameters A1 and A2 are highly correlated. Although the variation of parameter A1 was less than that of A2, the values of both parameters can change significantly in response to G × E × M. Nitrogen nutrition index (NNI) calculated using organ-specific Nc is in general consistent with NNI estimated with overall shoot Nc, indicating that a simple organ-specific Nc dilution curve may be used for wheat N diagnosis to assist N management. However, the significant differences in organ-specific Nc dilution curves across G × E × M conditions imply potential errors in Nc and crop N demand estimated using a general Nc dilution curve in crop models, highlighting a clear need for improvement in Nc calculations in such models. Our results provide new insights into how to improve modeling of crop nitrogen–biomass relations and N management practices under G × E × M.

Open Access Research Article Issue
Potential of Establishing the Universal Critical Nitrogen Dilution Curve for Japonica Rice
Plant Phenomics 2023, 5: 0036
Published: 27 March 2023
Abstract Collect

Establishing the universal critical nitrogen (NC) dilution curve can assist in crop N diagnosis at the regional scale. This study conducted 10-year N fertilizer experiments in Yangtze River Reaches to establish universal NC dilution curves for Japonica rice based on simple data-mixing (SDM), random forest algorithm (RFA), and Bayesian hierarchical model (BHM), respectively. Results showed that parameters a and b were affected by the genetic and environmental conditions. Based on RFA, highly related factors of a (plant height, specific leaf area at tillering end, and maximum dry matter weight during vegetative growth period) and b (accumulated growing degree days at tillering end, stem–leaf ratio at tillering end, and maximum leaf area index during vegetative growth period) were successfully applied to establish the universal curve. In addition, representative values (most probable number [MPN]) were selected from posterior distributions obtained by the BHM approach to explore universal parameters a and b. The universal curves established by SDM, RFA, and BHM-MPN were verified to have a strong N diagnostic capacity (N nutrition index validation R2 ≥ 0.81). In summary, compared with the SDM approach, RFA and BHM-MPN can greatly simplify the modeling process (e.g., defining N-limiting or non-N-limiting groups) while maintaining a good accuracy, which are more conducive to the application and promotion at the regional scale.

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