Sanjiang Plain-Amur River Basin aquifer is the aquifer shared by China and Russia, which is of great significance to water sources management for both countries, acting as a focused area by China and Russia. In this paper, the hydrogeological characteristics of the Sanjiang Plain-Amur River Basin is studied, aiming at understanding the differences as well as similarities of aquifer classification, chemical characteristics of groundwater, quantity of groundwater and groundwater evaluation methods of two countries, which will lay a solid foundation to further holistic study of the trans-boundary aquifer in the Sanjiang Plain-Amur River Basin.