Sort:
Issue
Remote Sensing for Rice Growth Stages Monitoring: Research Progress, Bottleneck Problems and Technical Optimization Paths
Smart Agriculture 2025, 7(3): 89-107
Published: 01 May 2025
Abstract PDF (43 MB) Collect
Downloads:43
Significance

The efficient and precise identification of rice growth stages through remote sensing technology holds critical significance for varietal breeding optimization and production management enhancement. Remote sensing, characterized by high spatial-temporal resolution and automated monitoring capabilities, provides transformative solutions for large-scale dynamic phenology monitoring, offering essential technical support to address climate change impacts and food security challenges in complex agroecosystems where precise monitoring of growth stage transitions enables yield prediction and stress-resilient cultivation management.

Progress

In recent years, the technical system for monitoring rice growth stages has achieved systematic breakthroughs in the perception layer, decision-making layer, and execution layer, forming a technological ecosystem covering the entire chain of "data acquisition-feature analysis-intelligent decision-making-precise operation". At the perception layer, a "space-air-ground" three-dimensional monitoring network has been constructed: High-altitude satellites (Sentinel-2, Landsat) realize regional-scale phenological dynamic tracking through wide-spectrum multi-temporal observations; low-altitude unmanned aerial vehicle (UAV) equipped with hyperspectral and light detection and ranging (LiDAR) sensors analyze the heterogeneity of canopy three-dimensional structure; near-ground sensor networks real-timely capture leaf-scale photosynthetic efficiency and nitrogen metabolism parameters. Radiometric calibration and temporal interpolation algorithms eliminate the spatio-temporal heterogeneity of multi-source data, forming continuous and stable monitoring capabilities. Innovations in technical methods show three integration trends: Firstly, multimodal data collaboration mechanisms break through the physical characteristic barriers between optical and radar data; secondly, deep integration of mechanistic models and data-driven approaches embeds the scattering by arbitrarily inclined leaves by arbitrary inclined leaves (PROSPECT + SAIL, PROSAIL) radiative transfer model into the long short-term memory (LSTM) network architecture; thirdly, cross-scale feature analysis technology breaks through by constructing organ-population association models based on dynamic attention mechanisms, realizing multi-granularity mapping between panicle texture features and canopy leaf area index (LAI) fluctuations. The current technical system has completed three-dimensional leaps: From discrete manual observations to full-cycle continuous perception, with monitoring frequency upgraded from weekly to hourly; from empirical threshold-based judgment to mechanism-data hybrid-driven, the cross-regional generalization ability of the model can be significantly improved; from independent link operations to full-chain collaboration of "perception-decision-execution", constructing a digital management closed-loop covering rice sowing to harvest, providing core technical support for smart farm construction.

Conclusions and Prospects

Current technologies face three-tiered challenges in data heterogeneity, feature limitations and algorithmic constraints. Future research should focus on three aspects: 1) Multi-source data assimilation systems to reconcile spatiotemporal heterogeneity through UAV-assisted satellite calibration and GAN-based cloud-contaminated data reconstruction; 2) Cross-scale physiological-spectral models integrating 3D canopy architecture with adaptive soil-adjusted indices to overcome spectral saturation; 3) Mechanism-data hybrid paradigms embedding thermal-time models into LSTM networks for environmental adaptation, developing lightweight CNNs with multi-scale attention for occlusion-resistant panicle detection, and implementing transfer learning for cross-regional model generalization. The convergence of multi-source remote sensing, intelligent algorithms, and physiological mechanisms will establish a full-cycle dynamic monitoring system based on agricultural big data.

Issue
Multi-Angle Imaging and Machine Learning Approaches for Accurate Rice Leaf Area Estimation
Scientia Agricultura Sinica 2025, 58(9): 1719-1734
Published: 01 May 2025
Abstract PDF (4.4 MB) Collect
Downloads:11
【Objective】

Rice leaf area is a critical physiological metric that indicates photosynthetic efficiency, energy conversion, and dry matter accumulation capacity. This study aimed to develop a simple and efficient rice leaf area imaging system and prediction method, so as to provide a theoretical foundation and technical support for rapid and accurate leaf area measurement.

【Method】

The study utilized representative rice varieties—Xiushui 134 (indica), Huanghuazhan (japonica), and Yongyou 1540 (indica-japonica hybrid)—as experimental materials. Leaf area data were collected from the aboveground parts during critical growth periods, and both flat-overhead-view and side-view images were captured. Using the PlantScreen high-throughput modular plant phenotyping platform, morphological and color feature information was extracted. Based on these data, various feature selection methods (Pearson correlation coefficient, maximal information coefficient (MIC), and recursive feature elimination (RFE)) combined with machine learning models (support vector regression (SVR), random forest regression (RFR), and XGBoost) and deep learning models (ResNet50, AlexNet, VGG, and SeNet) were employed to develop a simplified and efficient rice leaf area prediction model.

【Result】

(1) An imaging approach that integrated flat-overhead and multi-angle side views significantly outperformed single-view methods for leaf area prediction, with R2 values of 0.76–0.82 and coefficients of variation (CV) of 5.5%–13.7%, compared with R2 values of 0.51–0.78 and CVs of 9.7%–27.5% for single views. The optimal system used one flat-overhead-view and one side-view image, achieving R2 = 0.79, root mean square error (RMSE) = 95.3, mean absolute error (MAE) = 77.02, and CV = 6.5%. (2) Using MIC algorithm for key feature selection combined with the random forest regression model achieved excellent results (R2 = 0.84, RMSE = 81.8, and MAE = 63.3), noticeably outperforming other machine learning models. The deep learning model SeNet (R2 = 0.80, RMSE = 98.1, and MAE = 74.7) outperformed traditional ResNet50 and AlexNet models but showed no significant advantage over the MIC-RFR model. (3) Feature analysis indicated that the projected area and plant height from side-view images, as well as leaf perimeter and green-yellow characteristics from flat-overhead-view images, significantly contributed to leaf area prediction. The contribution of the side-view projected area (+117.4) was substantially greater than that of other features (ranging from 1.48 to 18.87).

【Conclusion】

This study employed a simple and efficient leaf area prediction imaging system (one flat-overhead-view combined with one side-view image), integrated with the MIC-RFR model, to meet the high-precision and stable prediction requirements for individual rice leaf area. This method provided a powerful tool and technical support for precision agriculture and crop breeding.

Open Access Research Article Issue
LKNet: Enhancing rice canopy panicle counting accuracy with an optimized point-based framework
Plant Phenomics 2025, 7(1): 100003
Published: 28 February 2025
Abstract Collect

Location-based methods for counting rice panicles have often been underestimated, primarily due to their perceived inferior performance when compared to detection-based techniques. However, we argue that the potential of these location-based methods has not been fully realized, largely owing to the limitations of existing model architectures. In response to this challenge, we introduce LKNet, an innovative model developed on the foundation of the location-based framework P2Pnet. To enhance the performance of panicle counting across diverse types and growth stages, we implemented several key strategies. Firstly, we reconstructed the localization loss function as a predictive probability distribution to reduce the influence of manual labeling. Additionally, we dynamically adapted the receptive field to better accommodate different panicle types through the use of large kernel convolutional blocks. We evaluated LKNet on several publicly available counting task datasets and achieved state-of-the-art performance on the Diverse Rice Panicle Detection dataset. Furthermore, we employed a rice panicle dataset collected at an altitude of 7 ​m, which includes various panicle types and growth stages for model training and evaluation. The results showed that LKNet effectively accommodates variations in panicle morphology, with R2 values ranging from 0.903 to 0.989. These findings highlight LKNet's potential to enhance precision in panicle counting in rice breeding programs.

Issue
Effects of Meteorological Factors on Quality of Late Japonica Rice During Late Season Grain Filling Stage Under ‘Early Indica and Late Japonica’ Cultivation Pattern in Southern China
Scientia Agricultura Sinica 2023, 56(1): 46-63
Published: 01 January 2023
Abstract PDF (1.4 MB) Collect
Downloads:6
【Objective】

The responses of the rice grain qualities to the climate factors during the grain filling period were studied to facilitate the variety screening and the agronomic practices optimization for japonica rice during the late rice season in southern rice region in China.

【Method】

To evaluate the effects of different climate factors during the grain filling period on the qualities of late japonica rice, the field experiment was conducted in Fuyang and Wenzhou, Zhejiang province, in 2018, using three late indica rice as control varieties and 20 japonica rice (including 10 inbred japonica rice, 3 japonica hybrids and 7 indica-japonica hybrids) as evaluating varieties.

【Result】

(1) Based on the results of clustering with grain qualities, the late indica rice varieties were classified as an unique category due to its highest aspect ratio (3.18) and high amylose content (19.40%). Compared with the late indica rice, the most of hybrid varieties had greater brown rice rate (4.31%−5.28%), milled rice rate (6.51%−9.33%), head rice rate (25.83%− 28.34%), gel consistency (1.81%−4.27%), alkali spreading value (11.62%−50.85%), and tasted value (2.31%−2.85%), with lower amylose content (20.98%−28.14%) and protein content (1.16%−14.85%), showing obvious improvement of rice quality. Whereas, the rice quality performance response to late season were differentiated within inbred japonica varieties, and some inbred japonica rice varieties originating from southern Jiangsu and Jiaxing (4 varieties) were similar to the those in the hybrid-japonica category, while the rest inbred japonica varieties from Jiangsu and Shanghai (6 varieties) belonged to another category due to their relatively poor rice quality performances (high chalkiness, chalky grain rate and protein content) in the late season. (2) The rice grain qualities were closely related to climate factors during grain filling period of late rice season. The stage of 10-20 days after full heading was identified as the sensitive period of climate factors on rice qualities. The brown rice rate was negatively correlated with daily solar radiation (R: -0.40−-0.19, P<0.05) and daily temperature difference (R: -0.45−-0.28, P<0.05), and positively correlated with daily minimum temperature (R: 0.24−0.53, P<0.05) and precipitation (R: 0.38−0.45, P<0.05). The chalkiness rate and chalkiness grain rate were significantly increased with the rainfall and night temperature (R: -0.37−-0.16, P<0.05; R: -0.43−-0.12, P<0.05), resulting in reducing rice appearance quality. Meanwhile, the rainfall and night temperature were negatively correlated with rice tasted value (R: -0.37−-0.16, P<0.05; R: -0.43−-0.12, P<0.05). The daily maximum temperature at grain filling stage was positively correlated with rice tasted value (R=0.37, P<0.05), while the daily minimum temperature was positively correlated with rice protein content (R=0.19, P<0.05), chalkiness (R=0.16, P<0.05), and chalkiness grain percentage (R=0.12, P<0.05).

【Conclusion】

The stage of 10-20 days after full heading was the key period for affecting rice grain quality by climate factor, and the improvement of rice qualities for late japonica varieties in southern rice region should focus on the integration of high-quality japonica genes with an indica gene of local adaptation, and the choice of hybrid rice (including indica-japonica hybrids and japonica hybrids) was more reliable and convenient than inbred japonica rice. The breeding of inbred japonica varieties should consider their ecological adaptability in combined with local climatic conditions.

Open Access Research paper Issue
Solar radiation-use characteristics of indica/japonica hybrid rice (Oryza sativa L.) in the late season in southeast China
The Crop Journal 2021, 9(2): 427-439
Published: 10 August 2020
Abstract PDF (2.7 MB) Collect
Downloads:10

New indica and japonica hybrid rice cultivars, such as the Yongyou series, provide farmers with very high yield potential. However, information on their canopy light capture and solar radiation use efficiency in the late season is limited. Field experiments were performed to compare the radiation-use parameters of four rice types: indica rice (IR), inbred japonica rice (IJR), hybrid japonica rice (HJR), and hybrid indica/japonica rice (HIJR), from 2016 to 2018 during the late season in Hangzhou, China. The grain yield, aboveground biomass, intercepted solar radiation (SI), and radiation-use efficiency (RUE) of the HIJR were on average respectively 13.4%–53.4%, 14.3%–30.6%, 7.6%–21.4%, and 8.2%–14.9% higher than those of the HJR, IJR, and IR. The leaf area index (LAI) of the HIJR was 18.2%–57.0% greater than that of the IJR and HJR at four growth stages, resulting in respectively 17.8%–38.5% and 10.7%–42.8% greater canopy light interception rates (LIR) and amount of intercepted solar radiation during the vegetative stage. The prolonged grain-filling stage also led to respectively 33.9%–52.6% and 30.5%–51.4% increases in amounts of incident and intercepted radiation for the HIJR relative to the IR during grain filling. These results indicate that the SI superiority of the HIJR was caused by canopy closure as rapid as that of the IR during the vegetative stage (greater LAI and canopy LIR during the growing season) and a grain-filling stage as long as that of the HJR. For grain-filling stage, differences in leaf Pn between HIJR, IR, and IJR were not significant, suggesting that the greater RUE of the HIJR (12.7%–52.8% higher) than that of the other rice types resulted from improved canopy architecture after flowering (FL). Principal components analysis (PCA) revealed that the superiority of the HIJR in terms of solar radiation use resulted from the greater canopy light capture capability of IR and the prolonged growth period (especially during grain filling) of japonica rice in the late growing season.

Open Access Research paper Issue
Effect of various crop rotations on rice yield and nitrogen use efficiency in paddy–upland systems in southeastern China
The Crop Journal 2018, 6(6): 576-588
Published: 28 September 2018
Abstract PDF (1.6 MB) Collect
Downloads:10

To evaluate the effects of various rotation systems on rice grain yield and N use efficiency, a paddy–upland cropping experiment (2013–2016) was conducted in southeastern China. The experiment was designed using six different rice––winter crop rotations: rice–fallow (RF), rice–wheat (RW), rice–potato with rice straw mulch (RP), rice–green manure (Chinese milk vetch; RC–G), rice–oilseed rape (RO), and rice–green manure crop (oilseed rape with fresh straw incorporated into soil at flowering; RO–G) and three N rates, N0 (0 kg N ha−1), N1 (142.5 kg N ha−1), and N2 (202.5 kg N ha−1). Average rice yields in the RF (5.93 t ha−1) rotation were significantly lower than those in the rotations with winter crops (7.20–7.48 t ha−1) under the N0 treatment, suggesting that incorporation of straw might be more effective for increasing soil N than winter fallow. The rice yield differences among the rotations varied by year with the N input. In general, the grain yields in the RP and RO–G rotations –were respectively 11.6–28.5% and 14.80–37.19% higher than those in the RF in plots with N applied. Increasing the N rate may have tended to minimize the average yield gap between the RF and the other rotations; the yield gaps were 18.55%, 4.14%, and 0.23% in N0, N1, and N2, respectively. However, the N recovery efficiency in the RF was significantly lower than that in other rotations, except for 2015 under both N1 and N2 rates, a finding that implies a large amount of chemical N loss. No significant differences in nitrogen agronomic efficiency (NAE) and physiological efficiency (NPE) were found between the rotations with legume (RC–G) and non–legume (RO and RW) winter crops, a result that may be due partly to straw incorporation. For this reason, we concluded that the return of straw could reduce differences in N use efficiency between rotations with and without legume crops. The degree of synchrony between the crop N demand and the N supply was evaluated by comparison of nitrogen balance degree (NBD) values. The NBD values in the RP and RW were significantly lower than those in the other rotations under both N1 and N2 rates. Thus, in view of the higher grain yield in the RP compared to the RW under the N1 rate, the RP rotation might be a promising practice with comparable grain yield and greater N use efficiency under reduced N input relative to the other rotations. The primary yield components of the RF and RP were identified as number of panicles m−2 and numbers of kernels panicle−1, respectively. The NAE and NPE were positively correlated with harvest index, possibly providing a useful indicator for evaluating N use efficiency.

Total 6