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Survey | Open Access

Imbalanced node classification on graphs with graph neural networks: A survey

Changhai Wang1Zhe Huang1Yuwei Xu2,3Yaoli Xu1( )
Software Engineering College, Zhengzhou University of Light Industry, Zhengzhou 450000, China
School of Cyber Science and Engineering, Southeast University, Nanjing 210000, China
Purple Mountain Laboratories for Network and Communication Security, Nanjing 210000, China
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Abstract

Imbalanced node classification is an important research topic in graph learning. With the rise of deep learning, powerful models like graph neural networks (GNNs) have been widely used in node classification tasks and achieved promising performance. However, real-world graphs are usually imbalanced, characterized by some classes having an adequate amount of data while others lack data. This imbalance presents the suboptimal classification performance of the model. Therefore, research on the GNNs-based imbalanced node classification is crucial. This article aims to systematically summarize the development status of GNNs in imbalanced node classification. First, the related concepts of GNNs and imbalanced node classification are introduced to establish a solid foundation for readers. Second, the methods are divided into data-level methods and algorithm-level methods, then subdivided into seven subcategories. Especially, we discuss the key thoughts, relative strengths, and weaknesses of classic methods in each subcategory. Then, datasets and common evaluation metrics are compiled to provide a wealth of useful resources. Finally, future research directions for imbalanced node classification on graphs are introduced to promote the boom of this field.

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Electronic Research Archive
Pages 1742-1784

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Cite this article:
Wang C, Huang Z, Xu Y, et al. Imbalanced node classification on graphs with graph neural networks: A survey. Electronic Research Archive, 2026, 34(3): 1742-1784. https://doi.org/10.3934/era.2026079

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Received: 10 November 2025
Revised: 21 January 2026
Accepted: 26 January 2026
Published: 27 February 2026
©2026 the Author(s), licensee AIMS Press.

This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0)