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Open Access

LLM4DEU: Fine Tuning Large Language Model for Medical Diagnosis in Outpatient and Emergency Department Visits of Neurosurgery

School of Computer and Communication Engineering, University of Science and Technology Beijing, Beijing 100083, China
Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China
Institute of Medical Intelligence, School of Computer Science and Technology, Beijing Jiaotong University, Beijing 100044, China
Fourth Medical Center of PLA General Hospital, Beijing 100142, China
Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China

Boran Wang and Yiming Liu contribute equally to this paper

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Abstract

Clinical diagnosis for complex disease conditions is a complicated decision process involving systematic inference and differentiation. Artificial Intelligence (AI) models have been a widely established approach to help improve the efficiency of various kinds of clinical decision tasks (e.g., diagnosis, treatment, and prognosis). However, due to the critical requirement of time efficiency, lack of sufficient information, and high probability of comorbid diseases in Outpatient and Emergency Settings (OES), it is still challenging to build clinically feasible AI models using the free text clinical records in OES for complex disease conditions, such as neurosurgery. Here we propose an AI diagnosis model, named LLM4DEU, for neurosurgery disease differentiations by fine-tuning a large language model (i.e., ChatGLM) using the Department of Neurosurgery, the Beijing Tiantan Hospital OES electronic health records. LLM4DEU obtained state-of-the-art performance on clinical diagnosis with a F1 score of 78.53%, which is superior to five well-known baselines (including deep learning models). In addition, we evaluated the actual performance of the model by case studies on the diagnosis of specific neurosurgical diseases (e.g., subdural hematoma, cerebral hemorrhage, and cerebral infarction). The experimental results show that the LLM4DEU model has significant advantages in diagnosing low-incidence disease conditions, and comparative analyses with clinical experts confirm the predictive power of the model in neurosurgical diagnosis.

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Tsinghua Science and Technology
Pages 2487-2504

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Cite this article:
Wang B, Liu Y, Tian H, et al. LLM4DEU: Fine Tuning Large Language Model for Medical Diagnosis in Outpatient and Emergency Department Visits of Neurosurgery. Tsinghua Science and Technology, 2025, 30(6): 2487-2504. https://doi.org/10.26599/TST.2024.9010125

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Received: 03 November 2023
Revised: 29 May 2024
Accepted: 03 July 2024
Published: 04 July 2025
© The author(s) 2025.

The articles published in this open access journal are distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/).