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Review Article | Open Access

Application of metagenomics in the study of groundwater microorganisms

Li-qiang Ge1,2Xin Yuan1,2( )Liu Yang3( )
National Research Center for Geoanalysis, Beijing 100037, China
Key Laboratory of Eco-geochemistry, Ministry of Natural Resources, Beijing 100037, China
Institute of Hydrogeology and Environmental Geology, Chinese Academy of Geological Sciences, Shijiazhuang 050061, China
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Abstract

With the rapid development of molecular biology technology, especially the application of metagenomics, many challenges in groundwater microbial research have been overcome. Metagenomics has enabled the exploration of the diversity of unculturable microorganisms in groundwater. This paper reviews macro genomics 16S rRNA and metagenomics sequencing data, highlighting recent applications of metagenomics in investigating groundwater microbial communities. It also examines the relationship between microbial diversity and environmental factors, the identification of functional microbial groups, the role of microorganisms in groundwater pollution remediation, and their contribution to the hydrogeochemical cycle. Finally, it provide insights into future research directions in groundwater microbiology.

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Journal of Groundwater Science and Engineering
Pages 90-100

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Cite this article:
Ge L-q, Yuan X, Yang L. Application of metagenomics in the study of groundwater microorganisms. Journal of Groundwater Science and Engineering, 2025, 13(1): 90-100. https://doi.org/10.26599/JGSE.2025.9280041

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Received: 16 July 2023
Accepted: 20 August 2024
Published: 22 November 2024
2305-7068/© 2025 Journal of Groundwater Science and Engineering Editorial Office

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0)