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Review | Open Access

Metabolites associated with endophytic fungi in agarwood: fungal compounds and host metabolites triggered by fungi

Tian-Jiao Maa,bYun Yanga,b( )
Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China
Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine, Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou, China
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Abstract

Agarwood is a scarce and highly prized resinous material, revered for its medicinal properties and distinctive aroma profile. Traditional medical manuscripts meticulously document their application in pain relief and the alleviation of gastrointestinal distress. Agarwood is formed in Aquilaria trees (Thymelaeaceae) as a response to external stimuli, a natural process that is typically slow and inefficient. Recent scientific research has revealed the significant role of endophytic fungi in enhancing the formation of agarwood. Metabolic analysis studies have identified 486 metabolites associated with these fungi. Among them, 54 compounds were produced directly by the fungi themselves, while 432 were generated through the metabolic reprogramming of the host tree induced by the fungi. These metabolites exhibit a diverse range of biological activities, such as potent anticancer and antioxidant effects. However, the mechanisms underlying the interactions between these fungi and their host warrant further investigation. This review collates more than six decades of research into the phytochemical characteristics and therapeutic potential of these metabolites, laying a solid groundwork for the development of new drugs and biotechnological applications in the future.

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Mycology
Pages 319-349

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Cite this article:
Ma T-J, Yang Y. Metabolites associated with endophytic fungi in agarwood: fungal compounds and host metabolites triggered by fungi. Mycology, 2026, 17(2): 319-349. https://doi.org/10.1080/21501203.2025.2602352

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Received: 19 September 2025
Accepted: 05 December 2025
Published: 28 February 2026
© 2026 The Author(s).

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.