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Research Article | Open Access

3D reconstruction of root system architecture in urban forest parks based on ground penetrating radar instantaneous amplitude analysis

Guoqiu Fana,b,c,dYinghang LieYili Zhenga,b,c,dQiaoling Hana,b,c,dHao Lianga,b,c,d( )Yandong Zhaoa,b,c,d
School of Technology, Beijing Forestry University, Beijing, 100083, China
Key Lab of State Forestry Administration for Forestry Equipment and Automation, Beijing, 100083, China
State Key Laboratory of Efficient Production of Forest Resources, Beijing, 100083, China
Research Center for Intelligent Forestry, Beijing Forestry University, Beijing, 100083, China
Shaanxi Niubeiliang National Nature Reserve, Xi'an, 710100, China
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Abstract

Root system architecture (RSA) is pivotal for comprehending the ecological adaptation strategies and resource acquisition mechanisms of urban flora, playing a vital role in soil stability, carbon sequestration, and ecosystem sustainability. However, the non-destructive detection and precise three-dimensional (3D) reconstruction of RSA within urban environments remain challenging. In this study, a non-destructive reconstruction method utilizing ground-penetrating radar (GPR) technology was developed to achieve 3D reconstruction and visualization of RSA, with the goal of advancing the intelligent construction and precise ecological management of urban forest parks. Field-based GPR surveys of a 9-year-old triploid poplar were conducted using a square grid and concentric circular scanning scheme. A 3D data volume (C-scan) was constructed from two-dimensional (2D) profiles, and the spatial distribution of RSA was reconstructed using instantaneous amplitude analysis. The method was validated by comparing the results with actual root structures in sandy loam environments. The research results of the 1600 ​MHz GPR under the square grid scanning scheme show that extracting the instantaneous amplitude isosurface of GPR can effectively reflect the spatial distribution of roots with diameters greater than 1 ​cm within a depth of 0.4 ​m subsurface. The accuracy of RSA reconstruction can reach 89 ​%. The results demonstrate the applicability of the proposed method for non-destructive environmental monitoring in urban forest parks, showing significant potential for the large-scale detection and reconstruction of subsurface root systems. This research provides a novel approach for RSA reconstruction with significant implications for urban ecosystem management, soil conservation, and climate resilience research. The method enhances our capability to monitor the growth and adaptation of urban roots, laying the groundwork for the large-scale, non-destructive analysis of RSA.

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Plant Phenomics
Article number: 100147

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Cite this article:
Fan G, Li Y, Zheng Y, et al. 3D reconstruction of root system architecture in urban forest parks based on ground penetrating radar instantaneous amplitude analysis. Plant Phenomics, 2025, 7(4): 100147. https://doi.org/10.1016/j.plaphe.2025.100147

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Received: 24 July 2025
Revised: 19 November 2025
Accepted: 07 December 2025
Published: 08 December 2025
© 2025 Nanjing Agricultural University.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).