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Research Article | Open Access

Distinct decomposition dynamics of heterogeneous carbon components in cultivated agricultural soils controlled by flexible microbial substrate utilization strategy

Wanqi Wang1,2,3,*Xuefeng Zhu1,3,*Yuzhu Li1,3Shuhan Dong1,2,3Yan Liu4Kaikai Min1,3Huijie Lü5,6Wei Zhang1,3Hongbo He1,3( )Xudong Zhang1,3
Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China
University of Chinese Academy of Sciences, Beijing 100049, China
Key Laboratory of Conservation Tillage and Ecological Agriculture of Liaoning Province, Shenyang 110016, China
College of Environmental and Chemical Engineering, Shenyang Ligong University, Shenyang 110159, China
Bayingol Vocational and Technical College, Korla 841000, China
Xinjiang Key Laboratory of Sustainable Management of Salinized Land and Regional Agricultural Technology, Korla 841000, China

* These authors contributed equally to this study.

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Highlights

• Plant debris dominates SOC mineralization, and microbial necromass controls stability.

• A shift from bacteria to fungi drives carbohydrates-to-lignin decomposition in C-rich soil.

• Actinomycetes dominate lignin and carbohydrates co-metabolism in C-starved habitats.

• Flexible substrate utilization strategy regulates the decomposition of heterogeneous SOC components.

Abstract

Improving soil organic matter (SOM) maintenance is crucial for terrestrial carbon (C) sequestration and ecosystem functioning. Conservation tillage favors SOM pool buildup; however, it remains unclear how the decomposition of heterogeneous components is manipulated by microbial substrate utilization strategy from the view of SOM stability. Here, a one-year microcosm incubation was conducted using surface soils developed under 12 years of conservation tillage (high-C soil) and maize residue removal (low-C soil). Temporal changes in lignin phenols, neutral sugars, and amino sugars in the soil were monitored along with microbial phospholipid fatty acids (PLFAs) and enzyme activities. Throughout incubation, lignin phenols declined more (20.8–26.3%) than the SOM (12.3–14.5%) and amino sugars (10.6–12.3%), highlighting the key role of plant debris in SOM mineralization, and complementarily, the greater contribution of microbial necromass to SOM stabilization. Moreover, the decomposition dynamics of neutral sugars and lignin were strongly influenced by C availability. In the low-C soil, these two types of compounds decomposed with similar temporal patterns and extents, and such substrate co-metabolism was dominantly mediated by actinomycetes. In contrast, in the high-C soil, a lower oxidases-to-carbohydrolases ratio regulated the sequential decomposition of labile neutral sugars followed by recalcitrant lignin. Such microbial substrate selectivity was associated with a shift in microbial community from bacterial dominance toward increased fungal contribution. Overall, our findings underscore the significant interplay between soil C availability and flexible microbial substrate utilization strategy in regulating decomposition of heterogeneous SOM components, as well as their distinct contributions in SOM turnover and stabilization.

References

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Journal of Integrative Agriculture (JIA)
Pages 3882-3892

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Cite this article:
Wang W, Zhu X, Li Y, et al. Distinct decomposition dynamics of heterogeneous carbon components in cultivated agricultural soils controlled by flexible microbial substrate utilization strategy. Journal of Integrative Agriculture (JIA), 2026, 25(9): 3882-3892. https://doi.org/10.1016/j.jia.2025.12.063

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Received: 01 August 2025
Revised: 06 November 2025
Accepted: 12 December 2025
Published: 31 December 2025
© 2026 CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer review under responsibility of Editorial Board of Journal of Integrative Agriculture.