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Research Article | Open Access

Functional analysis of CsAGL6 in flower development and pigmentation in cucumber (Cucumis sativus L.)

Li Qin1,3,*Zheyuan Liu1,3,*Shuai Li1,2,4Guanghua Cai1,2Jie Wang1Xueyong Yang1Jinjing Sun1( )
State Key Laboratory of Vegetable Biobreeding, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China
Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518124, China
National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, Sanya 572024, China
Shandong Key Laboratory of Bulk Open-field Vegetable Breeding, Key Laboratory of Huang Huai Protected Horticulture Engineering of Ministry of Agriculture and Rural Affairs, Institute of Vegetables, Shandong Academy of Agricultural Sciences, Jinan 250100, China

* These authors contributed equally to this study.

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Highlights

CsAGL6 participates in sepal and petal development by regulating CAL and SEP4 in cucumber.

CsAGL6 affects petal pigmentation by modulating genes involved in chlorophyll biosynthesis and chloroplast development in cucumber.

Abstract

Cucumber (Cucumis sativus L.) is a major vegetable crop worldwide, and its yield and quality are closely linked to flower development. AGAMOUS-LIKE 6 (AGL6), a member of the ancient MADS-box transcription factor family, plays a crucial role in flower development. However, the specific functions of its homolog in cucumber remain poorly understood. In this study, we demonstrate that CsAGL6 is predominantly expressed in flowers, with high expression levels observed in all floral organ primordia during the early stages of floral development. The petals of Csagl6 mutants exhibit a greener color compared to wild-type plants, along with a significant increase in total chlorophyll content. Additionally, the mutants show abnormal petal morphology, including changes in size and shape, as well as enlarged sepals resembling leaves occasionally. Molecular analysis reveals that CAULIFLOWER (CAL) and the E-class gene SEPALLATA 4 (SEP4) are significantly downregulated in the mutants, while the chlorophyll synthesis gene Early Light-Induced Protein 1 (ELIP1) and several stress-related genes in the chloroplasts are dramatically upregulated. Our findings provide novel insights into the functional role of CsAGL6 in regulating sepal and petal development, and offer a potential avenue for understanding the genetic control of flower pigmentation and organ morphology in Cucumis species.

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Journal of Integrative Agriculture (JIA)
Pages 2847-2858

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Cite this article:
Qin L, Liu Z, Li S, et al. Functional analysis of CsAGL6 in flower development and pigmentation in cucumber (Cucumis sativus L.). Journal of Integrative Agriculture (JIA), 2026, 25(7): 2847-2858. https://doi.org/10.1016/j.jia.2025.11.012

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Received: 28 March 2025
Revised: 09 July 2025
Accepted: 23 September 2025
Published: 13 November 2025
© 2026 CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer review under responsibility of Editorial Board of Journal of Integrative Agriculture.