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Research Article | Open Access

The genetic control of long sterile lemma during African rice domestication

Liang Luo1,2,*Wenkai Luo1,*Bin Gao1,*Kaihong Wang1Sijing Ma1Marie-Noelle Ndjiondjop3Chuanqing Sun4Zuofeng Zhu1( )Leqin Chang1,2( )
Frontiers Science Center for Molecular Design Breeding/National Center for Evaluation of Agricultural Wild Plants (Rice)/Department of Plant Genetics and Breeding, China Agricultural University, Beijing 100193, China
Sanya Institute, China Agricultural University, Sanya 572025, China
Africa Rice Center, Cotonou 01 BP 4029, Benin
State Key Laboratory of Plant Physiology and Biochemistry, China Agricultural University, Beijing 100193, China

* These authors contributed equally to this study.

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Highlights

• The first long sterile lemma gene lsl3 of African cultivated rice was reported.

• The geographical distribution analysis of the lsl3 haplotypes provides a reference for the molecular evolution of African cultivated rice.

• The key mutations comparison of lsl3 between African cultivated rice and Asian cultivated rice provides new evidence for the parallel domestication of rice and the independent origin of African cultivated rice.

Abstract

The inflorescence and spikelet structural units of rice significantly impact grain development. Among the grasses, the sterile lemma represents a unique spikelet organ exclusive to rice. As most studies on sterile lemma genes primarily focus on Asian cultivated rice (Oryza sativa L.), genes influencing the sterile lemma phenotype in African rice remain unreported. This study identified lsl3, a gene located on the short arm of chromosome 7 that controls the sterile lemma length in African rice. The key mutation of lsl3, leading to long sterile lemmas in African rice, was discovered and differed from that in Asian rice. The investigation of lsl3 not only provides a reference for the molecular evolution of cultivated rice in Africa but also offers new evidence supporting the parallel domestication of rice and the independent origin of Oryza glaberrima.

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Journal of Integrative Agriculture (JIA)
Pages 3118-3125

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Cite this article:
Luo L, Luo W, Gao B, et al. The genetic control of long sterile lemma during African rice domestication. Journal of Integrative Agriculture (JIA), 2026, 25(8): 3118-3125. https://doi.org/10.1016/j.jia.2024.11.031

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Received: 08 July 2024
Revised: 18 September 2024
Accepted: 08 October 2024
Published: 13 November 2024
© 2026 CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer review under responsibility of Editorial Board of Journal of Integrative Agriculture.