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Article | Open Access

ZCF4-dependent suppression of MMP-9 drives virulence in fluconazole-resistant Candida auris

Yue-Mei Hong1,#Lu Wang1,#Zuo-Jing Yin1,#Yun Zou2,#Zhi-Wen Wang2,#Xiu-Li Wang1Di Wu1Xiang-Kang Zeng2Jin-An Zhou1Wan-Xing Xu1Yan-Yan Sun1Tian-Yi Zhang1Jian Guo3Jian Bing4Guang-Hua Huang4Wen-Juan Wu3Lei Pan2( )Chang-Bin Chen2( )Hui Wang1 ( )Ning-Ning Liu1( )
State Key Laboratory of Systems Medicine for Cancer, Center for Single-Cell Omics, School of Public Health, Shanghai Jiao Tong University School of Medicine, Shanghai, China
The Joint Laboratory for Biomedical Research and Pharmaceutical Innovation, Unit of Pathogenic Fungal Infection & Host Immunity, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China
Department of Laboratory Medicine, Shanghai East Hospital, Tongji University School of Medicine, Shanghai, China
State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China

#These authors contributed equally to this work

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Highlights

• Fluconazole-resistant Candida auris exhibits a higher fitness advantag

• Mobilization of intracellular zinc enhances fluconazole-resistant C. auris resistance to macrophage killing.

• Fluconazole-resistant C. auris suppresses the PI3K-AKT-mTOR pathway and matrix metalloproteinase-9 (MMP-9) expression.

ZCF4 (encoding Zn(Ⅱ)2Cys6 transcription factor 4) negatively regulates C. auris virulence in zinc-deficient hosts.

Abstract

While multidrug-resistant Candida auris poses a global threat to public health, the impact and mechanism of drug resistance on fungal virulence remain unclear. By employing the same-parent-derived fluconazole-resistant C. auris strains, this study utilized in vitro screening and host–pathogen co-culture models. Labile zinc was visualized using the fluorescent probe Zinpyr and Zinquin. Mechanisms identified via dual RNA sequencing were further validated using genetic mutants and pharmacological inhibitors. For in vivo validation, a fly survival model was employed, followed by an infection model in C57BL/6J mice (total n = 84). Mice were challenged with C. auris via lateral tail vein injection and oral gavage. Efficacy was evaluated through daily survival monitoring, fungal burden via colony-forming unit (CFU) counting, histopathological examination of tissue sections, and cytokine level measurement. We revealed that fluconazole-resistant C. auris exhibits enhanced fitness and resistance to macrophage killing under zinc deficiency by mobilizing intracellular zinc. Mechanistically, the inhibition of gene encoding Zn(Ⅱ)2Cys6 transcription factor 4 (ZCF4) contributes to C. auris resistance to macrophage killing by suppressing the phosphoinositide 3-kinase (PI3K)-AKT-mammalian target of rapamycin (mTOR) pathway and downstream matrix metalloproteinase-9 (MMP-9) activity under low-zinc conditions. Furthermore, dietary zinc deficiency promotes the virulence of fluconazole-resistant C. auris. These findings highlight a fitness advantage of fluconazole-resistant C. auris under zinc-deficient conditions through host–fungal interactions, offering a potential nutrient intervention strategy against fungal infection.

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hLife
Pages 439-456

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Cite this article:
Hong Y-M, Wang L, Yin Z-J, et al. ZCF4-dependent suppression of MMP-9 drives virulence in fluconazole-resistant Candida auris. hLife, 2026, 4(7): 439-456. https://doi.org/10.1016/j.hlife.2026.04.004

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Received: 20 January 2026
Revised: 13 April 2026
Accepted: 29 April 2026
Published: 01 July 2026
© 2026 The Authors.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).