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Article | Open Access

Single-cell transcriptomic analysis of the terminal ileum identifies BCMA as a therapeutic target in IgA nephropathy

Yuemiao Zhang1,#( )Lan Wang1,#Junze Wu2,#Na Wan2,#Xingzi Liu1,#Miaomiao Lin3Jingmei Li2Jingyu Wang1Jingyi Wu1Jiawen Peng1Shaoqing Dang1Tong Xie1Hongyu Yang1Xin Zhang1Yang Li1Xujie Zhou1Lijun Liu1Sufang Shi1Timothy T. Lu4Peter K. Wung4David James Haddon4Yanni Jiang4Naren Gaowa5Jicheng Lv1Zijie Zhang2,6Chunmei Li2( )Rui Cheng2( )Hong Zhang1( )
Renal Division, Peking University First Hospital, Peking University Institute of Nephrology, Key Laboratory of Renal Disease, Ministry of Health of China, Key Laboratory of Chronic Kidney Disease Prevention and Treatment (Peking University), Ministry of Education, Beijing, China
State Key Laboratory for Conservation and Utilization of Bio-resource and School of Life Sciences, Yunnan University, Yunnan, China
Department of Integrated Traditional Chinese and Western Medicine, Peking University First Hospital, Institute of Integrated Traditional Chinese and Western Medicine, Peking University, Beijing, China
Candid Therapeutics Inc., California, USA
EpimAb Biotherapeutics Inc., Shanghai, China
Central Laboratory, Liver Disease Research Center and Department of Infectious Disease, The Affiliated Hospital of Yunnan University, Yunnan, China

#These authors contributed equally to this work

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Highlights

• Single-cell transcriptomics reveals marked expansion of IgA+ plasma cells in gut mucosa from IgA nephropathy patients.

• Circulating IgA+ cells of mucosal origin are elevated in patients with IgA nephropathy.

• Intestinal IgA+ plasma cells show B-cell maturation antigen (BCMA) upregulation relative to IgG+ plasma cells.

• CD3 × BCMA T-cell engagement selectively depletes IgA more efficiently than IgG or IgM in cynomolgus monkeys.

Abstract

Aberrant mucosal immune responses drive IgA nephropathy (IgAN), yet the cellular drivers of pathogenic IgA production remain undefined. We performed single-cell RNA sequencing (scRNA-seq) and bioinformatic profiling of paired terminal ileal biopsies and blood samples from IgAN patients and healthy controls (HCs) (n = 5 each). Key features identified by scRNA-seq were validated using flow cytometry with circulating samples from an independent group (IgAN = 30, HCs = 30, disease controls [DCs] = 10). Transcriptomic comparison between IgA+ and IgG+ plasma cells identified key regulatory genes further validated in another group (IgAN = 23, HCs = 14, DCs = 24). Finally, we evaluated the therapeutic potency of the CD3 × B-cell maturation antigen (BCMA) T-cell engager cizutamig (EMB-06) in cynomolgus monkeys (0, 1.5, 5, or 15 mg/kg, n = 10 per group) by quantifying B cells and serum immunoglobulins (IgA, IgG, and IgM). We found that intestinal IgA+ plasma cells exhibited a marked expansion in IgAN patients, unlike IgG+ plasma cells, preferentially expressing the receptor BCMA. We validated the high BCMA expression on IgA+ plasmablasts in IgAN patients, which positively correlated with 24 h proteinuria and mesangial hypercellularity degree, while negatively correlating with the estimated glomerular filtration rate. In cynomolgus monkeys, targeting BCMA+ plasmablasts with cizutamig selectively reduced serum immunoglobulins, with a disproportionately greater reduction in IgA than in IgG and IgM. Together, these data identify BCMA as a promising therapeutic target in IgAN and support further clinical evaluation of BCMA-directed therapies.

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hLife
Pages 233-248

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Cite this article:
Zhang Y, Wang L, Wu J, et al. Single-cell transcriptomic analysis of the terminal ileum identifies BCMA as a therapeutic target in IgA nephropathy. hLife, 2026, 4(4): 233-248. https://doi.org/10.1016/j.hlife.2025.12.010

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Received: 27 September 2025
Revised: 18 December 2025
Accepted: 25 December 2025
Published: 01 April 2026
© 2026 The Author(s).

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).