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Original Research | Open Access

Extracellular vesicles drive stress-induced antibiotic resistance spread in soil

Yi-Fei Qina,b,c,1Wan-Rong Zhangd,e,1Lu Wanga,b,cYi-Fei Wanga,b,cDa Linc,fTian-Gui CaigHong-Zhe LihQian-Sheng HuangcMatthias C. Rilligi,jDong Zhua,b,c( )
State Key Laboratory of Regional and Urban Ecology, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo, 315830, China
State Key Laboratory for Ecological Security of Regions and Cities, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
Yunnan Provincial Key Lab of Soil Carbon Sequestration and Pollution Control, Faculty of Environmental Science & Engineering, Kunming, 650500, Yunnan, China
Kunming University of Science & Technology, Kunming, 650500, Yunnan, China
University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
State Key Laboratory of Regional and Urban Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China
Institute of Biology, Freie Universität Berlin, Berlin, 14195, Germany
Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, 14195, Germany

1 Yi-Fei Qin and Wan-Rong Zhang contributed equally to this work.

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Abstract

Antimicrobial resistance threatens millions of lives annually, yet its acceleration by non-antibiotic pollutants remains poorly understood. Artificial sweeteners, now ubiquitous in soils and waters, are known individually to promote conjugative transfer of resistance genes, but real environments contain complex mixtures whose collective impact is unknown. Extracellular vesicles (EVs) released by stressed bacteria serve as protected, long-range vectors for antibiotic resistance genes (ARGs), yet whether sweetener diversity modulates this pathway has never been tested. Here we show that increasing artificial-sweetener diversity dramatically enriches ARGs, virulence factors and mobile genetic elements inside soil-derived Evs, driving compositional shifts in 30.5% of EV-associated genera while leaving the bulk microbiome largely undisturbed. EVs originate from a small, fast-growing Pseudomonadota subset that upregulates vesicle-biogenesis genes in response to oxidative and membrane stress; these vesicles selectively package chromosomal resistance traits and transfer phenotypic resistance to recipient Escherichia coli. This stress-induced decoupling reveals EVs as rapid, hidden mediators of resistome mobilization that community-level surveys miss. By demonstrating that pollutant diversity itself drives resistance dissemination through nanoscale vectors, our findings establish EVs as a critical new indicator within the One Health framework and call for revised environmental risk models that account for chemical complexity rather than single-compound exposures.

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Environmental Science and Ecotechnology

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Cite this article:
Qin Y-F, Zhang W-R, Wang L, et al. Extracellular vesicles drive stress-induced antibiotic resistance spread in soil. Environmental Science and Ecotechnology, 2026, 30. https://doi.org/10.1016/j.ese.2026.100681

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Received: 02 October 2025
Revised: 26 February 2026
Accepted: 26 February 2026
Published: 01 March 2026
© 2026 The Authors. Chinese Society for Environmental Sciences, Harbin Institute of Technology, Chinese Research Academy of Environmental Sciences.

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).