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Research paper | Open Access

Deep neural network algorithm for estimating maize biomass based on simulated Sentinel 2A vegetation indices and leaf area index

Xiuliang Jina( ), Zhenhai Lib, Haikuan Fengb, Zhibin Renc, Shaokun Lia( )
Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Key Laboratory of Crop Physiology and Ecology, Ministry of Agriculture, Beijing 100081, China
Beijing Research Center for Information Technology in Agriculture, Beijing Academy of Agriculture and Forestry Sciences,Beijing 100097, China
Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, Jilin, China

Peer review under responsibility of Crop Science Society of China and Institute of Crop Science, CAAS.

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Abstract

Accurate estimation of biomass is necessary for evaluating crop growth and predicting crop yield. Biomass is also a key trait in increasing grain yield by crop breeding. The aims of this study were (ⅰ) to identify the best vegetation indices for estimating maize biomass, (ⅱ) to investigate the relationship between biomass and leaf area index (LAI) at several growth stages, and (ⅲ) to evaluate a biomass model using measured vegetation indices or simulated vegetation indices of Sentinel 2A and LAI using a deep neural network (DNN) algorithm. The results showed that biomass was associated with all vegetation indices. The three-band water index (TBWI) was the best vegetation index for estimating biomass and the corresponding R2, RMSE, and RRMSE were 0.76, 2.84 t ha−1, and 38.22% respectively. LAI was highly correlated with biomass (R2 = 0.89, RMSE = 2.27 t ha−1, and RRMSE = 30.55%). Estimated biomass based on 15 hyperspectral vegetation indices was in a high agreement with measured biomass using the DNN algorithm (R2 = 0.83, RMSE = 1.96 t ha−1, and RRMSE = 26.43%). Biomass estimation accuracy was further increased when LAI was combined with the 15 vegetation indices (R2 = 0.91, RMSE = 1.49 t ha−1, and RRMSE = 20.05%). Relationships between the hyperspectral vegetation indices and biomass differed from relationships between simulated Sentinel 2A vegetation indices and biomass. Biomass estimation from the hyperspectral vegetation indices was more accurate than that from the simulated Sentinel 2A vegetation indices (R2 = 0.87, RMSE = 1.84 t ha−1, and RRMSE = 24.76%). The DNN algorithm was effective in improving the estimation accuracy of biomass. It provides a guideline for estimating biomass of maize using remote sensing technology and the DNN algorithm in this region.

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The Crop Journal
Pages 87-97

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Cite this article:
Jin X, Li Z, Feng H, et al. Deep neural network algorithm for estimating maize biomass based on simulated Sentinel 2A vegetation indices and leaf area index. The Crop Journal, 2020, 8(1): 87-97. https://doi.org/10.1016/j.cj.2019.06.005

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Received: 21 March 2019
Revised: 18 June 2019
Accepted: 19 June 2019
Published: 18 July 2019
© 2019 Crop Science Society of China and Institute of Crop Science, CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).