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Research Article

Bispecific aptamer-initiated 3D DNA nanomotor biosensor powered by DNAzyme and entropy-driven circuit for sensitive and specificity detection of lysozyme

Shuo Qi1,2, Yuhan Sun1,2, Xiaoze Dong1,2, Imran Mahmood Khan1,2, Yan Lv1,2, Yin Zhang3, Nuo Duan1,2, Shijia Wu1,2, Zhouping Wang1,2,3,4,5( )
State Key Laboratory of Food Science and Technology, International Joint Laboratory on Food Safety, Jiangnan University, Wuxi 214122, China
School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
Key Laboratory of Meat Processing of Sichuan, Chengdu University, Chengdu 610106, China
National Engineering Research Center for Functional Food, Jiangnan University, Wuxi 214122, China
Collaborative Inno vation Center of Food Safety and Quality Control in Jiangsu Province, Jiangnan University, Wuxi 214122, China
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Abstract

Dynamic DNA nanodevices have gained tremendous attention due to their extraordinary inherent functionality and advantages, however, dynamic DNA nanodevices-based biosensors are still challenging due to their high reliance on proteases and limited amplification capabilities. Herein, exploiting bispecific aptamer as initiators for the first time, we developed a three-dimensional (3D) DNA nanomotor biosensor powered by DNAzyme and entropy-driven circuit for sensitive and specific detection of lysozyme, in which walking and rolling strategies are efficiently integrated to achieve excellent signal amplification capability. Benefiting from the high selectivity of bispecific aptamer, the 3D DNA nanomotor biosensor can respond to lysozyme with high specificity and operate at high speed to release signals. The whole process is independent of protease, avoiding the influence of adverse environment on the operation stability. Under optimal conditions, it can achieve a limit of detection as low as 0.01 pg/mL with an excellent linear range of 0.05 pg/mL–500 ng/mL for lysozyme. Furthermore, the proposed strategy revealed high accuracy in the analysis of real samples, indicating a great potential for the application of nanomotor biosensors to the detection of non-nucleic acid targets.

Graphical Abstract

Herein, exploiting bispecific aptamer as initiators for the first time, we developed a three-dimensional (3D) DNA nanomotor biosensor powered by DNAzyme and entropy-driven circuit for sensitive and specific detection of lysozyme, in which walking and rolling strategies are efficiently integrated to achieve excellent signal amplification capability.

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Nano Research
Pages 1286-1295

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Cite this article:
Qi S, Sun Y, Dong X, et al. Bispecific aptamer-initiated 3D DNA nanomotor biosensor powered by DNAzyme and entropy-driven circuit for sensitive and specificity detection of lysozyme. Nano Research, 2023, 16(1): 1286-1295. https://doi.org/10.1007/s12274-022-4794-4
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Received: 24 June 2022
Revised: 18 July 2022
Accepted: 18 July 2022
Published: 21 August 2022
© Tsinghua University Press 2022