Plant Phenomics Open Access Editors-in-Chief: Seishi Ninomiya, Frédéric Baret, Yanfeng Ding, Zong-Ming Cheng
Volume 5, 2023
96 articles
Previous Issue
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Research Article | Open Access
Noninvasive Detection of Salt Stress in Cotton Seedlings by Combining Multicolor Fluorescence–Multispectral Reflectance Imaging with EfficientNet-OB2
Published: 08 December 2023
2023, 5: 0125
Review Article | Open Access
Application of Visible/Near-Infrared Spectroscopy and Hyperspectral Imaging with Machine Learning for High-Throughput Plant Heavy Metal Stress Phenotyping: A Review
Published: 30 November 2023
2023, 5: 0124
Database/Software Article | Open Access
Panicle-Cloud: An Open and AI-Powered Cloud Computing Platform for Quantifying Rice Panicles from Drone-Collected Imagery to Enable the Classification of Yield Production in Rice
Published: 16 October 2023
2023, 5: 0105
Perspective | Open Access
A Combined Genomics and Phenomics Approach is Needed to Boost Breeding in Sugarcane
Published: 14 July 2023
2023, 5: 0074
Research Article | Open Access
Semi-supervised Counting of Grape Berries in the Field Based on Density Mutual Exclusion
Published: 28 November 2023
2023, 5: 0115
Review Article | Open Access
Crop/Plant Modeling Supports Plant Breeding: Ⅱ. Guidance of Functional Plant Phenotyping for Trait Discovery
Published: 28 September 2023
2023, 5: 0091
Database/Software Article | Open Access
ExtSpecR: An R Package and Tool for Extracting Tree Spectra from UAV-Based Remote Sensing
Published: 16 October 2023
2023, 5: 0103
Perspective | Open Access
Can Distributed Ledgers Help to Overcome the Need of Labeled Data for Agricultural Machine Learning Tasks?
Published: 10 July 2023
2023, 5: 0070
Research Article | Open Access
The Dissection of Nitrogen Response Traits Using Drone Phenotyping and Dynamic Phenotypic Analysis to Explore N Responsiveness and Associated Genetic Loci in Wheat
Published: 22 December 2023
2023, 5: 0128
Review Article | Open Access
Crop/Plant Modeling Supports Plant Breeding: Ⅰ. Optimization of Environmental Factors in Accelerating Crop Growth and Development for Speed Breeding
Published: 09 October 2023
2023, 5: 0099
Database/Software Article | Open Access
Coupling Plant Growth Models and Pest and Disease Models: An Interaction Structure Proposal, MIMIC
Published: 04 August 2023
2023, 5: 0077
Perspective | Open Access
Diversifying Resistance Mechanisms in Cereal Crops Using Microphenomics
Published: 13 February 2023
2023, 5: 0023
Research Article | Open Access
A Pathway to Assess Genetic Variation of Wheat Germplasm by Multidimensional Traits with Digital Images
Published: 22 November 2023
2023, 5: 0119
Review Article | Open Access
Wearable Sensor: An Emerging Data Collection Tool for Plant Phenotyping
Published: 04 July 2023
2023, 5: 0051
Database/Software Article | Open Access
BreedingEIS: An Efficient Evaluation Information System for Crop Breeding
Published: 14 March 2023
2023, 5: 0029
Research Article | Open Access
Bio-Master: Design and Validation of a High-Throughput Biochemical Profiling Platform for Crop Canopies
Published: 08 December 2023
2023, 5: 0121
Research Article | Open Access
Bridging Time-series Image Phenotyping and Functional–Structural Plant Modeling to Predict Adventitious Root System Architecture
Published: 21 December 2023
2023, 5: 0127
Research Article | Open Access
LiDAR Is Effective in Characterizing Vine Growth and Detecting Associated Genetic Loci
Published: 17 November 2023
2023, 5: 0116
Research Article | Open Access
Making the Genotypic Variation Visible: Hyperspectral Phenotyping in Scots Pine Seedlings
Published: 14 November 2023
2023, 5: 0111
Research Article | Open Access
Estimating Compositions and Nutritional Values of Seed Mixes Based on Vision Transformers
Published: 10 November 2023
2023, 5: 0112
Research Article | Open Access
Combinatorial Maps, a New Framework to Model Agroforestry Systems
Published: 15 December 2023
2023, 5: 0120
Research Article | Open Access
Point Cloud Completion of Plant Leaves under Occlusion Conditions Based on Deep Learning
Published: 15 November 2023
2023, 5: 0117
Research Article | Open Access
GenoDrawing: An Autoencoder Framework for Image Prediction from SNP Markers
Published: 03 November 2023
2023, 5: 0113
Research Article | Open Access
Lightweight Deep Learning Models for High-Precision Rice Seedling Segmentation from UAV-Based Multispectral Images
Published: 30 November 2023
2023, 5: 0123
Research Article | Open Access
Exploring the Close-Range Detection of UAV-Based Images on Pine Wilt Disease by an Improved Deep Learning Method
Published: 15 December 2023
2023, 5: 0129
Research Article | Open Access
Small and Oriented Wheat Spike Detection at the Filling and Maturity Stages Based on WheatNet
Published: 30 October 2023
2023, 5: 0109
Research Article | Open Access
Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
Published: 09 October 2023
2023, 5: 0106
Research Article | Open Access
Screening of Ginkgo Individuals with Superior Growth Structural Characteristics in Different Genetic Groups Using Terrestrial Laser Scanning (TLS) Data
Published: 22 September 2023
2023, 5: 0092
Research Article | Open Access
Phenotyping of Salvia miltiorrhiza Roots Reveals Associations between Root Traits and Bioactive Components
Published: 02 October 2023
2023, 5: 0098
Research Article | Open Access
Application of an Improved 2-Dimensional High-Throughput Soybean Root Phenotyping Platform to Identify Novel Genetic Variants Regulating Root Architecture Traits
Published: 28 September 2023
2023, 5: 0097
Research Article | Open Access
Frost Damage Index: The Antipode of Growing Degree Days
Published: 04 October 2023
2023, 5: 0104
Research Article | Open Access
A Multiscale Point-Supervised Network for Counting Maize Tassels in the Wild
Published: 02 October 2023
2023, 5: 0100
Research Article | Open Access
Quantification of the Cumulative Shading Capacity in a Maize–Soybean Intercropping System Using an Unmanned Aerial Vehicle
Published: 10 November 2023
2023, 5: 0095
Research Article | Open Access
Detection and Reconstruction of Passion Fruit Branches via CNN and Bidirectional Sector Search
Published: 08 September 2023
2023, 5: 0088
Research Article | Open Access
SPSI: A Novel Composite Index for Estimating Panicle Number in Winter Wheat before Heading from UAV Multispectral Imagery
Published: 06 September 2023
2023, 5: 0087
Research Article | Open Access
Drone-Based Harvest Data Prediction Can Reduce On-Farm Food Loss and Improve Farmer Income
Published: 07 September 2023
2023, 5: 0086
Research Article | Open Access
Instance Segmentation and Berry Counting of Table Grape before Thinning Based on AS-SwinT
Published: 29 August 2023
2023, 5: 0085
Research Article | Open Access
Standardizing and Centralizing Datasets for Efficient Training of Agricultural Deep Learning Models
Published: 06 September 2023
2023, 5: 0084
Research Article | Open Access
To What Extent Does Yellow Rust Infestation Affect Remotely Sensed Nitrogen Status?
Published: 06 September 2023
2023, 5: 0083
Research Article | Open Access
Awn Image Analysis and Phenotyping Using BarbNet
Published: 04 August 2023
2023, 5: 0081
Research Article | Open Access
Eff-3DPSeg: 3D Organ-Level Plant Shoot Segmentation Using Annotation-Efficient Deep Learning
Published: 02 August 2023
2023, 5: 0080
Research Article | Open Access
The Importance of Using Realistic 3D Canopy Models to Calculate Light Interception in the Field
Published: 18 August 2023
2023, 5: 0082
Research Article | Open Access
Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa
Published: 28 July 2023
2023, 5: 0072
Research Article | Open Access
Deep Learning Enables Instant and Versatile Estimation of Rice Yield Using Ground-Based RGB Images
Published: 28 July 2023
2023, 5: 0073
Research Article | Open Access
Quantifying Contributions of Different Factors to Canopy Photosynthesis in 2 Maize Varieties: Development of a Novel 3D Canopy Modeling Pipeline
Published: 26 July 2023
2023, 5: 0075
Research Article | Open Access
3D U-Net Segmentation Improves Root System Reconstruction from 3D MRI Images in Automated and Manual Virtual Reality Work Flows
Published: 28 July 2023
2023, 5: 0076
Research Article | Open Access
Concise Cascade Methods for Transgenic Rice Seed Discrimination using Spectral Phenotyping
Published: 28 July 2023
2023, 5: 0071
Research Article | Open Access
Interaction of Genotype, Environment, and Management on Organ-Specific Critical Nitrogen Dilution Curve in Wheat
Published: 02 August 2023
2023, 5: 0078
Research Article | Open Access
Efficient Noninvasive FHB Estimation using RGB Images from a Novel Multiyear, Multirater Dataset
Published: 14 July 2023
2023, 5: 0068
Research Article | Open Access
EasyDAM_V3: Automatic Fruit Labeling Based on Optimal Source Domain Selection and Data Synthesis via a Knowledge Graph
Published: 27 July 2023
2023, 5: 0067
Research Article | Open Access
Application of Improved UNet and EnglightenGAN for Segmentation and Reconstruction of In Situ Roots
Published: 06 July 2023
2023, 5: 0066
Research Article | Open Access
Multispectral Phenotyping and Genetic Analyses of Spring Appearance in Greening Plant, Phedimus spp.
Published: 26 June 2023
2023, 5: 0063
Research Article | Open Access
PDDD-PreTrain: A Series of Commonly Used Pre-Trained Models Support Image-Based Plant Disease Diagnosis
Published: 18 May 2023
2023, 5: 0054
Research Article | Open Access
Enhancing Green Fraction Estimation in Rice and Wheat Crops: A Self-Supervised Deep Learning Semantic Segmentation Approach
Published: 18 July 2023
2023, 5: 0064
Research Article | Open Access
FCOS-LSC: A Novel Model for Green Fruit Detection in a Complex Orchard Environment
Published: 19 July 2023
2023, 5: 0069
Research Article | Open Access
A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background
Published: 23 May 2023
2023, 5: 0055
Research Article | Open Access
Combining High-Resolution Imaging, Deep Learning, and Dynamic Modeling to Separate Disease and Senescence in Wheat Canopies
Published: 22 June 2023
2023, 5: 0053
Research Article | Open Access
Phenotyping Key Fruit Quality Traits in Olive Using RGB Images and Back Propagation Neural Networks
Published: 23 June 2023
2023, 5: 0061
Research Article | Open Access
High-Throughput Field Plant Phenotyping: A Self-Supervised Sequential CNN Method to Segment Overlapping Plants
Published: 18 May 2023
2023, 5: 0052
Research Article | Open Access
Predicting and Visualizing Citrus Color Transformation Using a Deep Mask-Guided Generative Network
Published: 07 June 2023
2023, 5: 0057
Research Article | Open Access
Estimation of Rice Aboveground Biomass by UAV Imagery with Photosynthetic Accumulation Models
Published: 31 May 2023
2023, 5: 0056
Research Article | Open Access
CountShoots: Automatic Detection and Counting of Slash Pine New Shoots Using UAV Imagery
Published: 10 July 2023
2023, 5: 0065
Research Article | Open Access
Global Wheat Head Detection Challenges: Winning Models and Application for Head Counting
Published: 26 June 2023
2023, 5: 0059
Research Article | Open Access
Knowledge Distillation Facilitates the Lightweight and Efficient Plant Diseases Detection Model
Published: 28 June 2023
2023, 5: 0062
Research Article | Open Access
Classification of Plant Endogenous States Using Machine Learning-Derived Agricultural Indices
Published: 27 June 2023
2023, 5: 0060
Research Article | Open Access
A Strategy for the Acquisition and Analysis of Image-Based Phenome in Rice during the Whole Growth Period
Published: 08 June 2023
2023, 5: 0058
Research Article | Open Access
An Effective Image-Based Tomato Leaf Disease Segmentation Method Using MC-UNet
Published: 15 May 2023
2023, 5: 0049
Research Article | Open Access
A Mechanistic Model for Estimating Rice Photosynthetic Capacity and Stomatal Conductance from Sun-Induced Chlorophyll Fluorescence
Published: 09 May 2023
2023, 5: 0047
Research Article | Open Access
A Novel Feature Selection Strategy Based on Salp Swarm Algorithm for Plant Disease Detection
Published: 11 May 2023
2023, 5: 0039
Research Article | Open Access
Analyzing Nitrogen Effects on Rice Panicle Development by Panicle Detection and Time-Series Tracking
Published: 23 June 2023
2023, 5: 0048
Research Article | Open Access
Self-Supervised Plant Phenotyping by Combining Domain Adaptation with 3D Plant Model Simulations: Application to Wheat Leaf Counting at Seedling Stage
Published: 11 April 2023
2023, 5: 0041
Research Article | Open Access
A Precise Image-Based Tomato Leaf Disease Detection Approach Using PLPNet
Published: 12 May 2023
2023, 5: 0042
Research Article | Open Access
Determination of Fv/Fm from Chlorophyll a Fluorescence without Dark Adaptation by an LSSVM Model
Published: 30 March 2023
2023, 5: 0034
Research Article | Open Access
A Tea Buds Counting Method Based on YOLOv5 and Kalman Filter Tracking Algorithm
Published: 30 March 2023
2023, 5: 0030
Research Article | Open Access
Analyzing Changes in Maize Leaves Orientation due to GxExM Using an Automatic Method from RGB Images
Published: 09 May 2023
2023, 5: 0046
Research Article | Open Access
Multi-Source Data Fusion Improves Time-Series Phenotype Accuracy in Maize under a Field High-Throughput Phenotyping Platform
Published: 21 April 2023
2023, 5: 0043
Research Article | Open Access
WRA-Net: Wide Receptive Field Attention Network for Motion Deblurring in Crop and Weed Image
Published: 05 April 2023
2023, 5: 0031
Research Article | Open Access
Potential of Establishing the Universal Critical Nitrogen Dilution Curve for Japonica Rice
Published: 27 March 2023
2023, 5: 0036
Research Article | Open Access
From Laboratory to Field: Unsupervised Domain Adaptation for Plant Disease Recognition in the Wild
Published: 28 March 2023
2023, 5: 0038
Research Article | Open Access
Generating 3D Multispectral Point Clouds of Plants with Fusion of Snapshot Spectral and RGB-D Images
Published: 03 April 2023
2023, 5: 0040
Research Article | Open Access
Process-Based Crop Modeling for High Applicability with Attention Mechanism and Multitask Decoders
Published: 13 April 2023
2023, 5: 0035
Research Article | Open Access
Benchmarking Self-Supervised Contrastive Learning Methods for Image-Based Plant Phenotyping
Published: 03 April 2023
2023, 5: 0037
Research Article | Open Access
Hyperspectral Remote Sensing for Phenotyping the Physiological Drought Response of Common and Tepary Bean
Published: 16 January 2023
2023, 5: 0021
Research Article | Open Access
Prediction of Needle Physiological Traits Using UAV Imagery for Breeding Selection of Slash Pine
Published: 15 March 2023
2023, 5: 0028
Research Article | Open Access
Phenotyping of Silique Morphology in Oilseed Rape Using Skeletonization with Hierarchical Segmentation
Published: 15 March 2023
2023, 5: 0027
Research Article | Open Access
Improved Field-Based Soybean Seed Counting and Localization with Feature Level Considered
Published: 15 March 2023
2023, 5: 0026
Research Article | Open Access
Semi-Self-Supervised Learning for Semantic Segmentation in Images with Dense Patterns
Published: 24 February 2023
2023, 5: 0025
Research Article | Open Access
Dynamic UAV Phenotyping for Rice Disease Resistance Analysis Based on Multisource Data
Published: 16 January 2023
2023, 5: 0019
Research Article | Open Access
Phenotypic Analysis of Diseased Plant Leaves Using Supervised and Weakly Supervised Deep Learning
Published: 16 January 2023
2023, 5: 0022
Research Article | Open Access
The Gray Mold Spore Detection of Cucumber Based on Microscopic Image and Deep Learning
Published: 10 January 2023
2023, 5: 0011
Research Article | Open Access
From Prototype to Inference: A Pipeline to Apply Deep Learning in Sorghum Panicle Detection
Published: 16 January 2023
2023, 5: 0017
Research Article | Open Access
Rice Plant Counting, Locating, and Sizing Method Based on High-Throughput UAV RGB Images
Published: 30 January 2023
2023, 5: 0020
Research Article | Open Access
A Novel Intelligent System for Dynamic Observation of Cotton Verticillium Wilt
Published: 10 January 2023
2023, 5: 0013
Research Article | Open Access
Pleiotropy Structures Plant Height and Seed Weight Scaling in Barley despite Long History of Domestication and Breeding Selection
Published: 30 January 2023
2023, 5: 0015
Research Article | Open Access
TrichomeYOLO: A Neural Network for Automatic Maize Trichome Counting
Published: 28 February 2023
2023, 5: 0024
Research Article | Open Access
Quantification of Photosynthetic Pigments in Neopyropia yezoensis Using Hyperspectral Imagery
Published: 10 January 2023
2023, 5: 0012