TY - JOUR AU - Li, Xuyan AU - Wang, Shouwen AU - Li, Hongxue AU - Qian, Fangyun AU - Wang, Haiyang AU - Wang, Jingying AU - Zhai, Lulu AU - Shi, Baosheng AU - Huo, Junwei AU - Bian, Shaomin PY - 2026 TI - Transcriptome and metabolome analysis reveals regulatory network associated with light-independent anthocyanin biosynthesis in blueberry fruit JO - Horticultural Plant Journal SN - 2095-9885 SP - 584 EP - 602 VL - 12 IS - 3 AB - Anthocyanins are vital secondary metabolites contributing to fruit pigmentation and antioxidative properties. While light is a well-known regulator of anthocyanin biosynthesis, the molecular basis of light-independent anthocyanin accumulation remains underexplored. In this study, integrated analysis of metabolome and transcriptome showed that the anthocyanin content in blueberry (Vaccinium corymbosum ‘Bluetta’) fruit was slightly decreased by light-impermeable bagging treatment, while anthocyanin biosynthetic genes were transcriptionally inhibited to different levels, suggesting a slight influence of the bagging treatment on anthocyanin accumulation. Further observation showed that fruit bagging did not alter ethylene production but decreased ABA content. Noticeably, two VcMYBA/MYB1s were not transcriptionally altered by the light-impermeable bagging treatment. Consistently, histochemical GUS analysis and pharmacological manipulation suggested light-independent and ethylene-inducible expression of VcMYBA/MYB1. Moreover, WGCNA analysis revealed 3759 genes positively associated with MYBA/MYB1 such as ethylene-associated genes, etc. Additionally, VcbZIP55s and VcCOP1s were activated and inactivated by the bagging treatment, respectively. These findings provided a framework of light-independent anthocyanin biosynthesis in blueberry fruit. UR - https://doi.org/10.1016/j.hpj.2025.02.004 DO - 10.1016/j.hpj.2025.02.004