Discover the SciOpen Platform and Achieve Your Research Goals with Ease.
Search articles, authors, keywords, DOl and etc.
Data competitions have become a popular approach to crowdsource new data analysis methods for general and specialized data science problems. Data competitions have a rich history in plant phenotyping, and new outdoor field datasets have the potential to embrace solutions across research and commercial applications. We developed the Global Wheat Challenge as a generalization competition in 2020 and 2021 to find more robust solutions for wheat head detection using field images from different regions. We analyze the winning challenge solutions in terms of their robustness when applied to new datasets. We found that the design of the competition had an influence on the selection of winning solutions and provide recommendations for future competitions to encourage the selection of more robust solutions.
Gao H, Barbier G, Goolsby R. Harnessing the crowdsourcing power of social media for disaster relief. IEEE Intell Syst. 2011;26(3):10–14.
Prill RJ, Saez-Rodriguez J, Alexopoulos LG, Sorger PK, Stolovitzky G. Crowdsourcing network inference: The DREAM predictive signaling network challenge. Sci Signal. 2011;4(189):mr7.
Giuffrida MV, Chen F, Scharr H, Tsaftaris SA. Citizen crowds and experts: Observer variability in image-based plant phenotyping. Plant Methods. 2018;14:12.
Koepnick B, Flatten J, Husain T, Ford A, Silva DA, Bick MJ, Bauer A, Liu G, Ishida Y, Boykov A, et al. De novo protein design by citizen scientists. Nature. 2019;570(7761):390–394.
Korpela EJ, Anderson DP, Bankay R, Cobb J, Howard A, Lebofsky M, Siemion APV, von Korff J, Werthimer D. Status of the UC-Berkeley SETI efforts. Proc. SPIE. 2011;8152:815212.
Albetis J, Duthoit S, Guttler F, Jacquin A, Goulard M, Poilvé H, Féret JB, Dedieu G. Detection of Flavescence dorée grapevine disease using unmanned aerial vehicle (UAV) multispectral imagery. Remote Sens. 2017;9(4):308.
Fuentes A, Yoon S, Kim SC, Park DS. A robust deep-learning-based detector for real-time tomato plant diseases and pests recognition. Sensors. 2017;17(9):2022.
Toda Y, Okura F. How convolutional neural networks diagnose plant disease. Plant Phenomics. 2019;2019:9237136.
Madec S, Jin X, Lu H, de Solan B, Liu S, Duyme F, Heritier E, Baret F. Ear density estimation from high resolution RGB imagery using deep learning technique. Agric For Meteorol. 264:225–234.
David E, Madec S, Sadeghi-Tehran P, Aasen H, Zheng B, Liu S, Kirchgessner N, Ishikawa G, Nagasawa K, Badhon MA, et al. Global Wheat Head Detection (GWHD) Dataset: A large and diverse dataset of high-resolution RGB-labelled images to develop and benchmark wheat head detection methods. Plant Phenomics. 2020;2020:3521852.
David E, Serouart M, Smith D, Madec S, Velumani K, Liu S, Wang X, Pinto F, Shafiee S, Tahir ISA, et al. Global Wheat Head Detection 2021: An improved dataset for benchmarking wheat head detection methods. Plant Phenomics. 2021;2021:9846158.
Scharr H, Minervini M, French AP, Klukas C, Kramer DM, Liu X, Luengo I, Pape JM, Polder G, Vukadinovic D, et al. Leaf segmentation in plant phenotyping: A collation study. Mach Vis Appl. 2016;27(4):585–606.
Minervini M, Fischbach A, Scharr H, Tsaftaris SA. Finely-grained annotated datasets for image-based plant phenotyping. Pattern Recogn Lett. 2016;81:80–89.
Tsaftaris SA, Scharr H. Sharing the right data right: A symbiosis with machine learning. Trends Plant Sci. 2019;24(2):99–102.
Xiong H, Cao Z, Lu H, Madec S, Liu L, Shen C. TasselNetv2: In-field counting of wheat spikes with context-augmented local regression networks. Plant Methods. 2019;15:150.
Ren S, He K, Girshick R, Sun J. Faster R-CNN: Towards real-time object detection with region proposal networks. Adv Neural Inf Proces Syst. 2015;91–99.
Sadeghi-Tehran P, Virlet N, Ampe EM, Reyns P, Hawkesford MJ. DeepCount: In-field automatic quantification of wheat spikes using simple linear iterative clustering and deep convolutional neural networks. Front Plant Sci. 2019;10:1176.
Lu H, Liu L, Li Y-N, Zhao X-M, Wang X-Q, Cao Z-G. TasselNetV3: Explainable plant counting with guided upsampling and background suppression. IEEE Trans Geosci Remote Sens. 2021;60:4700515.
Gomez AS, Aptoula E, Parsons S, Bosilj P. Deep Regression Versus Detection for Counting in Robotic Phenotyping. IEEE Robot Autom Lett. 2021;6(2):2902–2907.
Thapa R, Zhang K, Snavely N, Belongie S, Khan A. The Plant Pathology Challenge 2020 data set to classify foliar disease of apples. Appl Plant Sci. 2020;8(9):e11390.
Liu C, Wang K, Lu H, Cao Z. Dynamic color transform networks for wheat head detection. Plant Phenomics. 2022;2022:9818452.
Distributed under a Creative Commons Attribution License 4.0 (CC BY 4.0).