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Review | Open Access

Geographical origin authentication of fruits: A decadal review (2014–2024) of technological progress and outlook

Jiyun Nie1,*( )Mengying Shuai1,*Yihui Liu1Xiaoming Li1Mingyu Liu1An Li2Duoyong Zhao3Qiusheng Chen4Xiaoli Liu1Zhichao Li1
College of Horticulture, Qingdao Agricultural University/Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs/National Technology Centre for Whole Process Quality Control of FSEN Horticultural Products (Qingdao)/Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao 266109, China
Institute of Quality Standards & Testing Technology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
Institute of Quality Standards & Testing Technology for Agro-Products, Xinjiang Academy of Agricultural Sciences, Urumqi 830091, China
Institute of Agricultural Product Quality, Safety and Nutrition, Tianjin Academy of Agricultural Sciences, Tianjin 300381, China

* These authors contributed equally to this study.

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Highlights

• Multi-omics integration improves accuracy but faces key markers selection challenges.

• Machine learning should shift from high-accuracy prediction to interpretable inference for origin certification.

• Agricultural practice variation reduces model generalization and should be included as a variable.

Abstract

Food fraud is an increasingly prevalent deliberate act of deception for profit. Hence, it is highly necessary to develop robust analytical methods to assess the authenticity of foods. In recent years, the geographical origin authenticity of fruits has attracted considerable public concern. The geographical origin of fruit is generally determined based on specific indicators such as elements, stable isotopes, and metabolites. Many studies have demonstrated that mineral elements and stable isotope ratios are effective indicators for geographical origin authentication as they are directly related to the geographical environment. Other techniques, such as spectroscopy and chromatography, also exhibit promising potential for fruit origin discrimination and authenticity assessment. Omics technologies have emerged as a key approach for authenticating the geographical origin of fruit. The integration of instrumental analysis techniques with machine learning enables high-precision discrimination of fruit geographical origin, and the growing trend toward combining multiple analytical techniques further enhances identification accuracy. Commonly used methods for geographical origin authentication include linear techniques such as PCA, PLS-DA, and LDA. Machine learning algorithms, including SVM, RF, and ANN, have also been applied to identify fruit origin with high accuracy. Future developments in this field should prioritize the consideration of agricultural practices to ensure reliable and practical authentication.

References

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Journal of Integrative Agriculture (JIA)
Pages 2669-2687

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Cite this article:
Nie J, Shuai M, Liu Y, et al. Geographical origin authentication of fruits: A decadal review (2014–2024) of technological progress and outlook. Journal of Integrative Agriculture (JIA), 2026, 25(7): 2669-2687. https://doi.org/10.1016/j.jia.2025.12.069

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Received: 13 March 2025
Revised: 11 September 2025
Accepted: 17 November 2025
Published: 31 December 2025
© 2026 CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer review under responsibility of Editorial Board of Journal of Integrative Agriculture.